Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943078.1_cds_XP_016486360.1_77205
CDS Infomation

[gene=LOC107806673] [db_xref=GeneID:107806673] [protein=scarecrow-like protein 8] [protein_id=XP_016486360.1] [location=complement(7891..9804)] [gbkey=CDS]
Sequence

ATGTCATCAGGTTTTCCCGGCGACTTCTACGGTGCCGGTGGGATTAACACCGGGAGATCT
ACCATGAATAACAACACACTCAGGTCTCAGCTTTCTGGAATTTTGCCCGACCCGGCTAAC
CAGATCGTGCTTGGGAGACCCAATTTAATGGGGAAGCGATCTCTTGCGGAGTTTCAACAG
CAGCAGCAATTTCAGTTTCTACAACAGCAGCAACAAAATCAGCAACAGCAGATGATTTTA
CAACAACAACAGCAACAACAAGGGCTTGGCTTTTATCTTCGTAACGTTAAGCCCAGAAGT
TACCAGCAAGCTTCTCCTGTAGATTTTTCTGCTGTTGCTATTTCCTCGATTTCATCTGAA
TTCTCTTCGTTTTCTTCTAATTCAAATGCTTCCACGATGAACACGCGCCATACTCTCCCT
GTTCTTCAACAACTCCGGTCACAGCCCGCTTTGCCTTTGGCTAATACTAATATTAGCGGG
TTCTCACATCCGGGTATCCAGACTTATTCCACGGGGGTTTATAACAGAGCAACCATTGGA
CAAGAATTATTGTCCCAGGAATCAGAGAAAAAGATGATGAACCAGCTTCAAGAGCTCGAG
AAACAGCTCCTAGACGACAACGATGAGGAGGACGGCGATACAGTTTCAGTTGTTACCAAC
AACGAGTGGTTACAGAATCTGATTAGCCCCTGTCAAAGCCAAAACCAGAACCAGAATCAG
AATCAGAAACTGGCTTCACTATCACCATCCTCATCGACGTCGTCATGTGCTTCTTCTACA
GAATCTCCGCCAATTTCTTGTCCCAAGCAGTCTATAACAGAGGCTGCTACTGCAATATCC
GAAGGTATAAACCATGTTGCAGTAGAGATCCTCACGCGCCTATCACAGGTTTCCAACGTC
AGAGGTTCTTCCATTCAGCGGTCTACAGCATACATGGTTTCGGCTTTGAGGTCGCGCGTG
AACCCCACAGATTACCCACCGCCGGTGTTGGAGTTGCACAACAAGGAACACACGGTATCT
ACACAGAATCTGTACGATGTATCCCCATGTTTCAAGCTCGGTTTCATGGCTGCGAATCTA
GCCATTCTTGAAGCTGTAACGGACCACCCTACGAACAAGATTCACGTCATTGATTTTGAC
GTCGGCCAAGGCGGACAGTACTTGCATTTACTGCATGCATTGGCTGCTAAGAAATCAGAA
AAGCCAGCTGTACTAAAGATCACGGCTTTCACAGAGCAAGTAGGCGGAGTTGACGATAGA
CTCAATTCTATCGGCGTGGAGCTGACAGCCGAGGCTAACAAAGTTGGAGTTTGTTTGTAT
TTCAACGTAATGGCTTGTAAAATTACTGATTTGAGCAGGGAAAAACTGGGGCTTGAACCT
GACGAGGCATTAGCAGTGAATTTTGCATTCAAATTGTACAGATTGCCTGACGAGAGCGTG
ACGACGGAGAATTTAAGGGATGAGCTTCTCCGGCGAGTGAAGGGATTATCGCCGAAGGTG
GTAACGGTGGTTGAGCAAGAATTGAACGGGAACACGGCGCCGTTTCTAGCGCGTGTGAAC
GAGGCGTGTGGGTATTACGGAGCGTTATTCGACTCGCTGGACGCGACTGTGTCAAGGGAT
AAATTAGAACGAGTCAGGATCGAGGAAGGACTGAGTCGGAAGATGGCTAACTCGGTAGCG
TGCGAAGGGAGGGACCGCGTTGAAAGATGCGAAGTGTTCGGGAAGTGGCGGGCCCGAATG
AGCATGGCTGGGTTCGTGCAAAGGCCCATGAGTCAACTCGTGGCTAACTCACTATGTTCG
AAGCTTAACTCGGGGACACGTGGCAACCCGGGCTTTACCGTGAATGAACAAAGTGGAGGT
ATCTGTTTTGGTTGGATGGGACGAACTCTTACCGTCGCATCTGCTTGGCGTTAA

Peptide Sequence

PEP ID

XP_016486360.1
PEP Infomation

PREDICTED: scarecrow-like protein 8 [Nicotiana tabacum]
Sequence

MSSGFPGDFYGAGGINTGRSTMNNNTLRSQLSGILPDPANQIVLGRPNLMGKRSLAEFQQ
QQQFQFLQQQQQNQQQQMILQQQQQQQGLGFYLRNVKPRSYQQASPVDFSAVAISSISSE
FSSFSSNSNASTMNTRHTLPVLQQLRSQPALPLANTNISGFSHPGIQTYSTGVYNRATIG
QELLSQESEKKMMNQLQELEKQLLDDNDEEDGDTVSVVTNNEWLQNLISPCQSQNQNQNQ
NQKLASLSPSSSTSSCASSTESPPISCPKQSITEAATAISEGINHVAVEILTRLSQVSNV
RGSSIQRSTAYMVSALRSRVNPTDYPPPVLELHNKEHTVSTQNLYDVSPCFKLGFMAANL
AILEAVTDHPTNKIHVIDFDVGQGGQYLHLLHALAAKKSEKPAVLKITAFTEQVGGVDDR
LNSIGVELTAEANKVGVCLYFNVMACKITDLSREKLGLEPDEALAVNFAFKLYRLPDESV
TTENLRDELLRRVKGLSPKVVTVVEQELNGNTAPFLARVNEACGYYGALFDSLDATVSRD
KLERVRIEEGLSRKMANSVACEGRDRVERCEVFGKWRARMSMAGFVQRPMSQLVANSLCS
KLNSGTRGNPGFTVNEQSGGICFGWMGRTLTVASAWR

Transcript Sequence

Gene sequence data has not been registered.